Information for 13-CCATTKGAGAATT (Motif 19)

T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
Reverse Opposite:
G T C A G C T A A G C T A C G T A G T C A C G T A G T C G T C A C T G A G T C A C G A T A T C G A T C G
p-value:1e-10
log p-value:-2.438e+01
Information Content per bp:1.716
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif86.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets42.1 +/- 26.8bp
Average Position of motif in Background51.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCATTKGAGAATT
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCATTKGAGAATT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCATTKGAGAATT
--AATGGAAAAT-
 T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCATTKGAGAATT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCATTKGAGAATT------
NTAATTDGCYAATTANNWWD
 A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCATTKGAGAATT
TGTTCCCATTGTGTACT-
 A C G T A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCATTKGAGAATT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCATTKGAGAATT
ACCACTTGAA----
 A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCATTKGAGAATT
TAAGCCACTTAACATT-
 A C G T A C G T A C G T A C G T T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCATTKGAGAATT
CCACTTGAA----
 T A G C A T G C C G T A A C G T A G C T A C G T T A C G G T C A T C A G G T C A T C G A C A G T A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T