Information for 7-CTGCAGGTTGACG (Motif 8)

A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
Reverse Opposite:
A T G C A C T G A C G T G T A C G T C A C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 19.8bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGCAGGTTGACG
SDGCAGGTGCNS-
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGCAGGTTGACG
--VCAGGTRDRY-
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGCAGGTTGACG
-AACAGGTGT---
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGACG
-NNCAGGTGNN--
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGTTGACG
CACAGCAGGGGG---
 A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGTTGACG
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGACG
-NNCAGGTGTN--
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGACG
-NNCAGGTGCG--
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGACG
-GACAGGTGTN--
 A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGTTGACG
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C T G C G T A G T A C A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T