Information for 6-ACTTTGTTTTAGG (Motif 5)

C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C T G A C G T A C G T A C T G A A T G C C T G A C T G A G T C A A T C G A G C T
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.7 +/- 18.9bp
Average Position of motif in Background70.6 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0186.1_Tcf3_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG--
NNTTTNTTTTNGNNN
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG---
----DGWTTTATGRCN
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACTTTGTTTTAGG
CCTTTGTTTT---
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACTTTGTTTTAGG-
--GCTATTTTTGGM
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG-
--KCTATTTTTRGH
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTTTGTTTTAGG
ACTTTCGTTTCT-
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG---
-----NTTTTACGACT
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG
---CTATTTTTGG
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG---
-TTCTATTTTTAGNNN
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTTTGTTTTAGG--
-TTTTTTTTCNNGTN
 C T G A A T G C A C G T A G C T A G C T A T C G A G C T A C G T A C G T A G C T G T C A A C T G A C T G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A