Information for 5-CTTGTGGCTGCCT (Motif 3)

A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C T A G A G T C C G T A A C T G A T G C A G T C C T G A A G T C C G T A G C T A C T A G
p-value:1e-18
log p-value:-4.340e+01
Information Content per bp:1.897
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 22.1bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGCTGCCT
GTCTGTGGTTT---
 A C G T A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGCTGCCT
NNTGTGGTTT---
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGCTGCCT
NNHTGTGGTTWN--
 A C G T A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTTGTGGCTGCCT
RTCATGTGAC-----
 A C G T A C G T A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTGTGGCTGCCT
---TWGTCTGV--
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGCTGCCT
-CTGTGGTTTN--
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGCTGCCT
TTTGCGGTTT---
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTTGTGGCTGCCT
-----NGCTN---
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGCTGCCT--
GGNGCGNCTGTTNNN
 A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTTGTGGCTGCCT
GTCATGTGACC----
 A C G T A C G T A G T C C A G T A C G T A C T G A G C T A C T G A T C G A G T C A C G T A C T G A G T C A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T