p-value: | 1e-8 |
log p-value: | -1.982e+01 |
Information Content per bp: | 1.819 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.63% |
Number of Background Sequences with motif | 3.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 44.6 +/- 13.9bp |
Average Position of motif in Background | 63.5 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | SGTTGCYGGGYRRCKR KGTTGCTAGGMAACA- |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --SGTTGCYGGGYRRCKR NCCGTTGCTANGNGN--- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -SGTTGCYGGGYRRCKR CTGTTGCTAGGS----- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --SGTTGCYGGGYRRCKR NNCGTTGCTATGGNN--- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------SGTTGCYGGGYRRCKR- NTNNNNNGTTGCTANGGNNCANA |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | SGTTGCYGGGYRRCKR --WDNCTGGGCA---- |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | SGTTGCYGGGYRRCKR -GTTGCCATGGNAAC- |
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STAT3/MA0144.2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | SGTTGCYGGGYRRCKR --CTTCTGGGAAA--- |
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E2F8/MA0865.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | SGTTGCYGGGYRRCKR -TTTGGCGGGAAA--- |
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Stat4/MA0518.1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | SGTTGCYGGGYRRCKR --TTTCCAGGAAATGG |
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