Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-240 | -5.546e+02 | 0.0000 | 195.0 | 22.41% | 271.1 | 0.56% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-168 | -3.890e+02 | 0.0000 | 193.0 | 22.18% | 630.2 | 1.31% | motif file (matrix) |
svg |
3 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-23 | -5.403e+01 | 0.0000 | 17.0 | 1.95% | 17.7 | 0.04% | motif file (matrix) |
svg |
4 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-10 | -2.346e+01 | 0.0000 | 128.0 | 14.71% | 3910.6 | 8.11% | motif file (matrix) |
svg |
5 |
| Sp1(Zf)/Promoter/Homer | 1e-6 | -1.576e+01 | 0.0000 | 50.0 | 5.75% | 1222.6 | 2.54% | motif file (matrix) |
svg |
6 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.398e+01 | 0.0001 | 179.0 | 20.57% | 7000.5 | 14.52% | motif file (matrix) |
svg |
7 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-5 | -1.228e+01 | 0.0002 | 46.0 | 5.29% | 1229.5 | 2.55% | motif file (matrix) |
svg |
8 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-5 | -1.206e+01 | 0.0003 | 106.0 | 12.18% | 3784.8 | 7.85% | motif file (matrix) |
svg |
9 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-5 | -1.173e+01 | 0.0003 | 12.0 | 1.38% | 133.9 | 0.28% | motif file (matrix) |
svg |
10 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.141e+01 | 0.0004 | 166.0 | 19.08% | 6669.4 | 13.84% | motif file (matrix) |
svg |
11 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -1.045e+01 | 0.0010 | 70.0 | 8.05% | 2324.9 | 4.82% | motif file (matrix) |
svg |
12 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -9.745e+00 | 0.0018 | 5.0 | 0.57% | 22.7 | 0.05% | motif file (matrix) |
svg |
13 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.347e+00 | 0.0024 | 312.0 | 35.86% | 14406.3 | 29.89% | motif file (matrix) |
svg |
14 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -9.182e+00 | 0.0027 | 88.0 | 10.11% | 3234.8 | 6.71% | motif file (matrix) |
svg |
15 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-3 | -8.639e+00 | 0.0043 | 53.0 | 6.09% | 1729.8 | 3.59% | motif file (matrix) |
svg |
16 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.534e+00 | 0.0045 | 46.0 | 5.29% | 1441.9 | 2.99% | motif file (matrix) |
svg |
17 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -8.523e+00 | 0.0045 | 82.0 | 9.43% | 3024.1 | 6.27% | motif file (matrix) |
svg |
18 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -8.429e+00 | 0.0045 | 46.0 | 5.29% | 1448.2 | 3.00% | motif file (matrix) |
svg |
19 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.337e+00 | 0.0046 | 119.0 | 13.68% | 4781.9 | 9.92% | motif file (matrix) |
svg |
20 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -8.191e+00 | 0.0050 | 49.0 | 5.63% | 1591.6 | 3.30% | motif file (matrix) |
svg |
21 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-3 | -8.118e+00 | 0.0052 | 35.0 | 4.02% | 1017.6 | 2.11% | motif file (matrix) |
svg |
22 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.269e+00 | 0.0115 | 37.0 | 4.25% | 1150.2 | 2.39% | motif file (matrix) |
svg |
23 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.000e+00 | 0.0144 | 97.0 | 11.15% | 3894.2 | 8.08% | motif file (matrix) |
svg |
24 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.595e+00 | 0.0207 | 52.0 | 5.98% | 1849.1 | 3.84% | motif file (matrix) |
svg |
25 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.526e+00 | 0.0213 | 50.0 | 5.75% | 1766.6 | 3.66% | motif file (matrix) |
svg |
26 |
| YY1(Zf)/Promoter/Homer | 1e-2 | -6.408e+00 | 0.0231 | 11.0 | 1.26% | 207.5 | 0.43% | motif file (matrix) |
svg |
27 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -6.257e+00 | 0.0259 | 10.0 | 1.15% | 180.6 | 0.37% | motif file (matrix) |
svg |
28 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -6.015e+00 | 0.0317 | 36.0 | 4.14% | 1195.3 | 2.48% | motif file (matrix) |
svg |
29 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.014e+00 | 0.0317 | 80.0 | 9.20% | 3207.0 | 6.65% | motif file (matrix) |
svg |
30 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -5.973e+00 | 0.0317 | 78.0 | 8.97% | 3116.2 | 6.46% | motif file (matrix) |
svg |
31 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -5.907e+00 | 0.0319 | 48.0 | 5.52% | 1732.8 | 3.59% | motif file (matrix) |
svg |
32 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.821e+00 | 0.0337 | 49.0 | 5.63% | 1785.4 | 3.70% | motif file (matrix) |
svg |
33 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.803e+00 | 0.0337 | 45.0 | 5.17% | 1607.8 | 3.34% | motif file (matrix) |
svg |
34 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.726e+00 | 0.0349 | 61.0 | 7.01% | 2345.6 | 4.87% | motif file (matrix) |
svg |
35 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.669e+00 | 0.0359 | 128.0 | 14.71% | 5606.5 | 11.63% | motif file (matrix) |
svg |
36 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.647e+00 | 0.0359 | 20.0 | 2.30% | 558.9 | 1.16% | motif file (matrix) |
svg |
37 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.484e+00 | 0.0408 | 31.0 | 3.56% | 1020.3 | 2.12% | motif file (matrix) |
svg |
38 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.455e+00 | 0.0409 | 50.0 | 5.75% | 1866.5 | 3.87% | motif file (matrix) |
svg |
39 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.387e+00 | 0.0427 | 64.0 | 7.36% | 2524.1 | 5.24% | motif file (matrix) |
svg |
40 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.316e+00 | 0.0447 | 55.0 | 6.32% | 2111.9 | 4.38% | motif file (matrix) |
svg |
41 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -5.193e+00 | 0.0493 | 92.0 | 10.57% | 3898.5 | 8.09% | motif file (matrix) |
svg |
42 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.186e+00 | 0.0493 | 39.0 | 4.48% | 1394.6 | 2.89% | motif file (matrix) |
svg |
43 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.976e+00 | 0.0585 | 98.0 | 11.26% | 4227.2 | 8.77% | motif file (matrix) |
svg |
44 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -4.932e+00 | 0.0597 | 103.0 | 11.84% | 4482.8 | 9.30% | motif file (matrix) |
svg |
45 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.849e+00 | 0.0634 | 10.0 | 1.15% | 221.6 | 0.46% | motif file (matrix) |
svg |
46 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -4.737e+00 | 0.0693 | 57.0 | 6.55% | 2271.3 | 4.71% | motif file (matrix) |
svg |