Information for 9-GAACGCTTTG (Motif 19)

A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A C T G A A C T G T G A C T A C G A C G T A G C T A T G C
p-value:1e-7
log p-value:-1.795e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif73.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.8 +/- 27.1bp
Average Position of motif in Background46.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAACGCTTTG-
AGGVNCCTTTGT
 A C G T A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAACGCTTTG----
----CCTTTGATGT
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAACGCTTTG----
----CCWTTGTYYB
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAACGCTTTG-
-----CTTTGT
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAACGCTTTG-------
AATCCCTTTGATCTATC
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAACGCTTTG----
----YCTTTGTTCC
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACGCTTTG----
TGAACCCGATGACCC
 A C G T A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAACGCTTTG-------
ATTTCCTTTGATCTATA
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAACGCTTTG------
--TNCCTTTGATCTTN
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAACGCTTTG------
-AACCCTTTGATCTTT
 A T C G T C G A G T C A A T G C A C T G A G T C A G C T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T