Information for 1-YSATTGGYYV (Motif 1)

A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
Reverse Opposite:
A G T C T C A G T C A G A G T C A G T C C G T A T G C A A G C T T A G C T C A G
p-value:1e-180
log p-value:-4.149e+02
Information Content per bp:1.694
Number of Target Sequences with motif292.0
Percentage of Target Sequences with motif33.80%
Number of Background Sequences with motif330.1
Percentage of Background Sequences with motif3.99%
Average Position of motif in Targets50.9 +/- 23.6bp
Average Position of motif in Background47.6 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYV
CCGATTGGCT-
 A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:YSATTGGYYV--
TGATTGGCTANN
 A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYV----
CTGATTGGTCNATTT
 A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.82
Offset:-7
Orientation:forward strand
Alignment:-------YSATTGGYYV-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.77
Offset:3
Orientation:forward strand
Alignment:YSATTGGYYV
---TTGGCA-
 A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYV
TTGATTGN---
 A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:YSATTGGYYV
CCATTGTTC-
 A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:YSATTGGYYV-
--NTTGGCANN
 A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-YSATTGGYYV
CTCATTGTC--
 A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-YSATTGGYYV
NTAATTGG---
 A C G T A G T C A T C G C T G A A C G T A C G T A C T G A C T G A G T C A G T C T C A G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T