Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-108 | -2.510e+02 | 0.0000 | 103.0 | 12.39% | 220.7 | 0.45% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-75 | -1.740e+02 | 0.0000 | 104.0 | 12.52% | 496.2 | 1.02% | motif file (matrix) |
svg |
3 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-20 | -4.778e+01 | 0.0000 | 31.0 | 3.73% | 173.2 | 0.36% | motif file (matrix) |
svg |
4 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-17 | -4.024e+01 | 0.0000 | 67.0 | 8.06% | 1118.2 | 2.30% | motif file (matrix) |
svg |
5 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-17 | -4.006e+01 | 0.0000 | 94.0 | 11.31% | 2006.2 | 4.13% | motif file (matrix) |
svg |
6 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-14 | -3.281e+01 | 0.0000 | 44.0 | 5.29% | 614.0 | 1.26% | motif file (matrix) |
svg |
7 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-12 | -2.811e+01 | 0.0000 | 65.0 | 7.82% | 1379.3 | 2.84% | motif file (matrix) |
svg |
8 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.362e+01 | 0.0000 | 70.0 | 8.42% | 1721.8 | 3.54% | motif file (matrix) |
svg |
9 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-9 | -2.253e+01 | 0.0000 | 75.0 | 9.03% | 1959.7 | 4.03% | motif file (matrix) |
svg |
10 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-9 | -2.171e+01 | 0.0000 | 168.0 | 20.22% | 6106.0 | 12.57% | motif file (matrix) |
svg |
11 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-8 | -2.063e+01 | 0.0000 | 37.0 | 4.45% | 669.3 | 1.38% | motif file (matrix) |
svg |
12 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-8 | -2.021e+01 | 0.0000 | 9.0 | 1.08% | 27.9 | 0.06% | motif file (matrix) |
svg |
13 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-8 | -1.913e+01 | 0.0000 | 106.0 | 12.76% | 3442.5 | 7.09% | motif file (matrix) |
svg |
14 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | -1.683e+01 | 0.0000 | 103.0 | 12.39% | 3467.8 | 7.14% | motif file (matrix) |
svg |
15 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.519e+01 | 0.0000 | 26.0 | 3.13% | 464.7 | 0.96% | motif file (matrix) |
svg |
16 |
| NFY(CCAAT)/Promoter/Homer | 1e-5 | -1.381e+01 | 0.0000 | 59.0 | 7.10% | 1748.6 | 3.60% | motif file (matrix) |
svg |
17 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.300e+01 | 0.0000 | 20.0 | 2.41% | 334.1 | 0.69% | motif file (matrix) |
svg |
18 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-5 | -1.241e+01 | 0.0001 | 28.0 | 3.37% | 610.8 | 1.26% | motif file (matrix) |
svg |
19 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.239e+01 | 0.0001 | 83.0 | 9.99% | 2894.2 | 5.96% | motif file (matrix) |
svg |
20 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-5 | -1.236e+01 | 0.0001 | 70.0 | 8.42% | 2313.0 | 4.76% | motif file (matrix) |
svg |
21 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-5 | -1.206e+01 | 0.0001 | 91.0 | 10.95% | 3290.3 | 6.77% | motif file (matrix) |
svg |
22 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-5 | -1.196e+01 | 0.0001 | 22.0 | 2.65% | 422.1 | 0.87% | motif file (matrix) |
svg |
23 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.168e+01 | 0.0001 | 41.0 | 4.93% | 1127.9 | 2.32% | motif file (matrix) |
svg |
24 |
| Sp1(Zf)/Promoter/Homer | 1e-5 | -1.157e+01 | 0.0001 | 37.0 | 4.45% | 975.0 | 2.01% | motif file (matrix) |
svg |
25 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-4 | -1.136e+01 | 0.0002 | 56.0 | 6.74% | 1768.5 | 3.64% | motif file (matrix) |
svg |
26 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.122e+01 | 0.0002 | 29.0 | 3.49% | 688.5 | 1.42% | motif file (matrix) |
svg |
27 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.115e+01 | 0.0002 | 32.0 | 3.85% | 802.5 | 1.65% | motif file (matrix) |
svg |
28 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.096e+01 | 0.0002 | 20.0 | 2.41% | 385.9 | 0.79% | motif file (matrix) |
svg |
29 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -1.092e+01 | 0.0002 | 36.0 | 4.33% | 966.0 | 1.99% | motif file (matrix) |
svg |
30 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.083e+01 | 0.0002 | 130.0 | 15.64% | 5297.9 | 10.91% | motif file (matrix) |
svg |
31 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.057e+01 | 0.0003 | 53.0 | 6.38% | 1689.0 | 3.48% | motif file (matrix) |
svg |
32 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -1.039e+01 | 0.0004 | 35.0 | 4.21% | 953.0 | 1.96% | motif file (matrix) |
svg |
33 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.885e+00 | 0.0006 | 166.0 | 19.98% | 7250.1 | 14.92% | motif file (matrix) |
svg |
34 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -9.868e+00 | 0.0006 | 30.0 | 3.61% | 781.7 | 1.61% | motif file (matrix) |
svg |
35 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-4 | -9.782e+00 | 0.0006 | 101.0 | 12.15% | 3983.9 | 8.20% | motif file (matrix) |
svg |
36 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-4 | -9.750e+00 | 0.0006 | 58.0 | 6.98% | 1966.9 | 4.05% | motif file (matrix) |
svg |
37 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -9.383e+00 | 0.0008 | 116.0 | 13.96% | 4768.1 | 9.82% | motif file (matrix) |
svg |
38 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -9.210e+00 | 0.0010 | 51.0 | 6.14% | 1694.7 | 3.49% | motif file (matrix) |
svg |
39 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -8.848e+00 | 0.0013 | 81.0 | 9.75% | 3112.3 | 6.41% | motif file (matrix) |
svg |
40 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.494e+00 | 0.0019 | 41.0 | 4.93% | 1306.2 | 2.69% | motif file (matrix) |
svg |
41 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.120e+00 | 0.0026 | 102.0 | 12.27% | 4221.3 | 8.69% | motif file (matrix) |
svg |
42 |
| GFY(?)/Promoter/Homer | 1e-3 | -8.049e+00 | 0.0028 | 11.0 | 1.32% | 178.9 | 0.37% | motif file (matrix) |
svg |
43 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.042e+00 | 0.0028 | 38.0 | 4.57% | 1206.1 | 2.48% | motif file (matrix) |
svg |
44 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.970e+00 | 0.0029 | 213.0 | 25.63% | 10049.2 | 20.69% | motif file (matrix) |
svg |
45 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-3 | -7.967e+00 | 0.0029 | 8.0 | 0.96% | 98.9 | 0.20% | motif file (matrix) |
svg |
46 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.757e+00 | 0.0034 | 6.0 | 0.72% | 55.1 | 0.11% | motif file (matrix) |
svg |
47 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -7.705e+00 | 0.0035 | 38.0 | 4.57% | 1228.7 | 2.53% | motif file (matrix) |
svg |
48 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-3 | -7.667e+00 | 0.0036 | 9.0 | 1.08% | 129.6 | 0.27% | motif file (matrix) |
svg |
49 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-3 | -7.599e+00 | 0.0037 | 53.0 | 6.38% | 1909.5 | 3.93% | motif file (matrix) |
svg |
50 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.547e+00 | 0.0038 | 171.0 | 20.58% | 7873.0 | 16.21% | motif file (matrix) |
svg |
51 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.488e+00 | 0.0040 | 15.0 | 1.81% | 321.5 | 0.66% | motif file (matrix) |
svg |
52 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -7.408e+00 | 0.0042 | 47.0 | 5.66% | 1650.1 | 3.40% | motif file (matrix) |
svg |
53 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -6.906e+00 | 0.0069 | 33.0 | 3.97% | 1064.4 | 2.19% | motif file (matrix) |
svg |
54 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.897e+00 | 0.0069 | 6.0 | 0.72% | 65.4 | 0.13% | motif file (matrix) |
svg |
55 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.826e+00 | 0.0072 | 32.0 | 3.85% | 1026.3 | 2.11% | motif file (matrix) |
svg |
56 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.791e+00 | 0.0073 | 86.0 | 10.35% | 3586.4 | 7.38% | motif file (matrix) |
svg |
57 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.583e+00 | 0.0088 | 89.0 | 10.71% | 3764.0 | 7.75% | motif file (matrix) |
svg |
58 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.555e+00 | 0.0089 | 40.0 | 4.81% | 1400.0 | 2.88% | motif file (matrix) |
svg |
59 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.522e+00 | 0.0091 | 67.0 | 8.06% | 2679.9 | 5.52% | motif file (matrix) |
svg |
60 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.452e+00 | 0.0096 | 46.0 | 5.54% | 1684.5 | 3.47% | motif file (matrix) |
svg |
61 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -6.367e+00 | 0.0102 | 21.0 | 2.53% | 593.0 | 1.22% | motif file (matrix) |
svg |
62 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.027e+00 | 0.0142 | 4.0 | 0.48% | 32.1 | 0.07% | motif file (matrix) |
svg |
63 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.927e+00 | 0.0154 | 138.0 | 16.61% | 6403.4 | 13.18% | motif file (matrix) |
svg |
64 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.827e+00 | 0.0168 | 63.0 | 7.58% | 2562.3 | 5.27% | motif file (matrix) |
svg |
65 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.790e+00 | 0.0171 | 38.0 | 4.57% | 1371.2 | 2.82% | motif file (matrix) |
svg |
66 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.772e+00 | 0.0172 | 44.0 | 5.29% | 1652.4 | 3.40% | motif file (matrix) |
svg |
67 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.625e+00 | 0.0196 | 12.0 | 1.44% | 278.0 | 0.57% | motif file (matrix) |
svg |
68 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.586e+00 | 0.0201 | 45.0 | 5.42% | 1717.3 | 3.54% | motif file (matrix) |
svg |
69 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.527e+00 | 0.0210 | 14.0 | 1.68% | 356.1 | 0.73% | motif file (matrix) |
svg |
70 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.256e+00 | 0.0271 | 73.0 | 8.78% | 3133.2 | 6.45% | motif file (matrix) |
svg |
71 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -4.752e+00 | 0.0443 | 26.0 | 3.13% | 907.7 | 1.87% | motif file (matrix) |
svg |
72 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.733e+00 | 0.0445 | 49.0 | 5.90% | 2001.4 | 4.12% | motif file (matrix) |
svg |