Information for 9-CTCCTTTGCTTCC (Motif 9)

A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G T A C G T A A C T G G T A C C G T A G T C A C G T A C T A G A C T G C G T A A C T G
p-value:1e-13
log p-value:-3.215e+01
Information Content per bp:1.903
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.9 +/- 30.2bp
Average Position of motif in Background50.5 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCTTTGCTTCC
--CCTTTGTTTT-
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTCCTTTGCTTCC
-------GCTTCC
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCCTTTGCTTCC-
--CAGCTGTTTCCT
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCTTTGCTTCC
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTTTGCTTCC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTTTGCTTCC--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTCCTTTGCTTCC-----
-----TTACTTCCTNGTN
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCCTTTGCTTCC----
------NACTTCCGGGT
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCCTTTGCTTCC-----
---CTTTGTTTACTTTTN
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCCTTTGCTTCC
--CCTTTGTT---
 A G T C C G A T A G T C A G T C A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T