Information for 17-TGACTGTCAC (Motif 31)

C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C
Reverse Opposite:
A C T G A C G T C A T G C G T A T G A C C G T A A C T G G A C T A T G C G C T A
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.656
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.54%
Number of Background Sequences with motif995.9
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets57.7 +/- 25.7bp
Average Position of motif in Background51.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGACTGTCAC--
TGTCTGDCACCT
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGACTGTCAC--
CTGTCTGTCACCT
 A C G T C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGACTGTCAC-
-VGCTGWCAVB
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGACTGTCAC
--CCTGTCAA
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGACTGTCAC
--GCTGTCAA
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TGACTGTCAC
---NTGTCAN
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGACTGTCAC---
-GSCTGTCACTCA
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T A C G T A C G T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTCAC-
BTGABTGACAGS
 A C G T C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGACTGTCAC---
AAGCACCTGTCAATAT
 A C G T A C G T A C G T C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGACTGTCAC--
----AGTCACGC
 C G A T T A C G C T G A T G A C G C A T A C T G G C A T G T A C G T C A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G