Information for 8-AAGGCTAATG (Motif 21)

C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G
Reverse Opposite:
G T A C C G T A A C G T A G C T C T G A T A C G A G T C G T A C C G A T A G C T
p-value:1e-10
log p-value:-2.493e+01
Information Content per bp:1.852
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif78.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets60.7 +/- 23.9bp
Average Position of motif in Background49.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGGCTAATG--
WATGCAAATGAG
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAGGCTAATG--
TATGCWAATBAV
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AAGGCTAATG---
---GNTAATTANN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AAGGCTAATG---
---NNTAATTANN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AAGGCTAATG-
---GKTAATGR
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGGCTAATG---
---NNTAATTANN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGGCTAATG---
---GNTAATTANN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGGCTAATG---
---NNTAATTANN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTAATG-
TTATGCAAATTA
 A C G T C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAGGCTAATG--
----CTAATTAN
 C T G A C G T A A C T G A C T G A T G C G A C T C T G A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C