Information for 10-TGTCTCADTTAGC (Motif 7)

A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
C T A G G T A C A C G T C G T A C G T A G C T A C G A T A C T G C G T A C T A G C T G A A G T C G T C A
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.7 +/- 20.7bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barhl1/MA0877.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGTCTCADTTAGC
---NNCAATTANN
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGTCTCADTTAGC
----BCMATTAG-
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGTCTCADTTAGC
---ANCGTTTANN
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGTCTCADTTAGC
---CCCAATTAGC
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

PH0110.1_Nkx1-2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTCTCADTTAGC----
TGNACTAATTAGTGNAN
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C

HESX1/MA0894.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGTCTCADTTAGC
---NCCAATTANC
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

PH0090.1_Lbx2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGTCTCADTTAGC----
TGCATTAATTAATGCGA
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTCTCADTTAGC
----CCAATTAA-
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

LBX2/MA0699.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGTCTCADTTAGC
---GCCAATTAGC
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C
A C G T A C G T A C G T T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C

PH0175.1_Vax2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTCTCADTTAGC----
-GNCTTAATTAGTGNNN
 A C G T A C T G A G C T A G T C A C G T A G T C C G T A C G A T A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C