Information for 6-CAAAGCACAAWGCTGC (Motif 5)

T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
Reverse Opposite:
T C A G G T A C C T G A A C T G A G T C C G A T C G A T C G A T A C T G A C G T A C T G G A T C C G A T A C G T A G C T A C T G
p-value:1e-16
log p-value:-3.771e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 27.6bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
---VRRACAAWGG---
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
------ACAAAG----
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
---AAAACAATGG---
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
---GGAACAAAGR---
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC--
------ACAAAGGNBCCT
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAAGCACAAWGCTGC
-CTCACACAATGGCGC
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
---RNAACAATGG---
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
---AAAACAAAGG---
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAAAGCACAAWGCTGC
----RAACAATGGN--
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAAAGCACAAWGCTGC
-----GACAATGNN--
 T G A C T C G A T G C A C G T A C T A G A G T C C G T A A G T C G C T A C G T A C G T A C T A G G T A C A G C T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T