Information for 17-TGCAAAGAAGTGGTTT (Motif 29)

C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
Reverse Opposite:
T C G A C G T A G C T A A T G C G T A C G T C A T A G C A C G T C A G T G T A C A G C T C G A T A C G T A C T G A G T C C G T A
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 20.1bp
Average Position of motif in Background50.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCAAAGAAGTGGTTT-
-----AAAACCGGTTTT
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
-----TTAAGTGGT--
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT--
--NNNTTAATTGGTTTTT
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T A C G T A C G T
A C G T A C G T C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
-----TTAAGTGCTT-
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT--
--GNNTTAATTGGTTGTT
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T A C G T A C G T
A C G T A C G T C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
AACACTGAAATTGTT-
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT--
--NNNTTAATTGGTTTTN
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T A C G T A C G T
A C G T A C G T C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
------AAACCGGTTT
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
-----TTAAGTGGN--
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCAAAGAAGTGGTTT
NANAANTAATTANTTA
 C G A T C T A G T G A C G T C A C G T A C T G A A C T G G T C A G T C A A T C G A C G T A C T G A T C G C A G T C G A T A G C T
G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A