Information for 19-TTCCATCAACCTT (Motif 28)

A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A C T A G A C T G A C G T A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 25.1bp
Average Position of motif in Background65.4 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTCCATCAACCTT--
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCCATCAACCTT
ATTGCATCAT----
 A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATCAACCTT
ATTGCATCAK----
 A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATCAACCTT
TATTGCATCATCC--
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCCATCAACCTT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCCATCAACCTT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCCATCAACCTT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCATCAACCTT
TTGCAACATN---
 A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCCATCAACCTT
GGCCATTAAC---
 A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCCATCAACCTT
GYCATCMATCAT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A C G T A G T C C G T A C G T A A G T C A G T C A G C T A G C T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T