Information for 18-TCATTGACTGTGA (Motif 27)

A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
Reverse Opposite:
C G A T G T A C C G T A T G A C C G T A A C T G A C G T G T A C C G T A C G T A A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 16.1bp
Average Position of motif in Background58.5 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCATTGACTGTGA
GGAGGTCATTAATTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCATTGACTGTGA
---TTGACTTTT-
 A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTGACTGTGA
NNCATTCATTCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCATTGACTGTGA
YCATTAMC-----
 A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCATTGACTGTGA
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGACTGTGA--
CTCATTAATTATGCAT
 A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCATTGACTGTGA
ATGGTTCAATAATTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCATTGACTGTGA-
TCAGNGAGCGTGAC
 A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCATTGACTGTGA
GTAATTAA------
 A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TCATTGACTGTGA
NNNACCTCATTATCNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T A C G T C A T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T A C G T