Information for 12-CAGTGAGGAGKWAAAS (Motif 12)

T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
Reverse Opposite:
T A G C C G A T A G C T A C G T G C A T G T C A A G T C A G C T G T A C A G T C A C G T A T G C C G T A G T A C A C G T A C T G
p-value:1e-12
log p-value:-2.848e+01
Information Content per bp:1.749
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.8 +/- 22.5bp
Average Position of motif in Background53.6 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGTGAGGAGKWAAAS
NGTGTTCAVTSAAGCGKAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGTGAGGAGKWAAAS
AANTCATGCGTGAA--
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGTGAGGAGKWAAAS
-----AGGTGTGAAA-
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGTGAGGAGKWAAAS
----AAGGTGTGAAA-
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGTGAGGAGKWAAAS--
-GAAAAGGTGTGAAAATT
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G A C G T A C G T
A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGTGAGGAGKWAAAS
-----AGGTGTTAAT-
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGTGAGGAGKWAAAS
AAAAAGAGGAAGTA---
 A C G T T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGAGGAGKWAAAS
TGAGTCAGCA-------
 A C G T T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAGTGAGGAGKWAAAS
----CGGAAGTGAAAC
 T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGAGGAGKWAAAS
SCAGYCADGCATGAC--
 A C G T T A G C C G T A C A T G C G A T A T C G C G T A A C T G A C T G C T G A T C A G A C G T C G T A C G T A C T G A C G T A A T C G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T