Information for 12-CTGCCCCCTGTGG (Motif 17)

A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C T G A A C T G A C T G A C T G A C T G C T A G A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 21.3bp
Average Position of motif in Background16.6 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTGCCCCCTGTGG---
-GACCCCCCGCTGTGC
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGCCCCCTGTGG-
--GTCCCCAGGGGA
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTGCCCCCTGTGG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCCCTGTGG--
-GACCCCCCGCTGTG
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTGCCCCCTGTGG
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGCCCCCTGTGG---
-ACCCCCCCGGGGGGN
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCCCTGTGG---
-GACCCCCCGCTGCGC
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGCCCCCTGTGG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCCCTGTGG---
-CCCCCCCGGGGGGGT
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGCCCCCTGTGG---
--CCCCCCCGGGGGNN
 A G T C C G A T A C T G A G T C A G T C A G T C A G T C A G T C A G C T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G