Information for 13-CACATGHMRA (Motif 16)

G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
Reverse Opposite:
C G A T G A C T C A T G C A T G T G A C C T G A C G A T T A C G A C G T A C T G
p-value:1e-7
log p-value:-1.636e+01
Information Content per bp:1.601
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.37%
Number of Background Sequences with motif1176.6
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets55.0 +/- 28.2bp
Average Position of motif in Background50.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CACATGHMRA
GGTCACATGAC--
 A C G T A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CACATGHMRA
AAGCACATGG---
 A C G T A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACATGHMRA
ATCACGTGAC--
 A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACATGHMRA
ATCACGTGAC--
 A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CACATGHMRA
NCACCTGTN--
 A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACATGHMRA
ACCACTTGAA--
 A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACATGHMRA
NGKCACGTGM---
 A C G T A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACATGHMRA
GTCACGTGGM--
 A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACATGHMRA
GNCACGTG----
 A C G T A C G T G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACATGHMRA
CACATTCCAT
 G T A C C G T A A T G C C G T A G A C T A C T G G T A C G T A C C T G A G C T A
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T