Information for 9-CTKCCCCTAGTGGGGA (Motif 9)

A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
Reverse Opposite:
A G C T A T G C G T A C A G T C A G T C C G T A A G T C A G C T C T G A A C T G C T A G A C T G A T C G G T A C C G T A A T C G
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.795
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.6 +/- 21.7bp
Average Position of motif in Background67.8 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTKCCCCTAGTGGGGA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTKCCCCTAGTGGGGA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTKCCCCTAGTGGGGA--
-TGCGCATAGGGGAGGAG
 A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A A C G T A C G T
A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CTKCCCCTAGTGGGGA
---------GTGGAT-
 A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTKCCCCTAGTGGGGA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.54
Offset:10
Orientation:forward strand
Alignment:CTKCCCCTAGTGGGGA
----------TGGGGA
 A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTKCCCCTAGTGGGGA
TTCCCCCTAC------
 A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTKCCCCTAGTGGGGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTKCCCCTAGTGGGGA
-CACCCCCGGGGGGG-
 A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A
A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTKCCCCTAGTGGGGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T G C A G T C A G T C G T A C A G C T C T G A C T A G A C G T C T A G A C T G C A T G A T C G C T G A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A