Information for 8-TCACCAGGCAGGA (Motif 6)

C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
Reverse Opposite:
C A G T A G T C A G T C C A G T A C T G G A T C T A G C G C A T C T A G A C T G C G A T T A C G C G T A
p-value:1e-15
log p-value:-3.493e+01
Information Content per bp:1.753
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif76.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.8 +/- 21.6bp
Average Position of motif in Background47.7 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCACCAGGCAGGA--
CAAATCCAGACATCACA
 A C G T A C G T C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCACCAGGCAGGA
---CCAGACAG--
 C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCACCAGGCAGGA--
----AAGGCAAGTGT
 C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCACCAGGCAGGA-
----CWGGCGGGAA
 C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A A C G T
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCACCAGGCAGGA
NGTCCCNNGGGA---
 A C G T A C G T C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------TCACCAGGCAGGA--
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCACCAGGCAGGA
CACAGCAGGGGG--
 A C G T C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCACCAGGCAGGA
--ANCAGGAAGT-
 C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCACCAGGCAGGA
CCTCACCTG------
 A C G T A C G T C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCACCAGGCAGGA
---CCAGACRSVB
 C G A T A T G C G C T A G T A C A G T C C G T A A T C G C A T G G T A C G T C A A C T G T A C G G C T A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C