Information for 7-GTCRGCCCSGAKCGGS (Motif 5)

A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
Reverse Opposite:
A T G C A G T C A T G C C T A G G T C A A C G T A G T C A T G C A C T G A C T G A C T G A G T C A G T C A C T G C T G A A T G C
p-value:1e-15
log p-value:-3.672e+01
Information Content per bp:1.874
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 25.3bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCRGCCCSGAKCGGS
--CTGCCCGCA-----
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTCRGCCCSGAKCGGS
GTGGGCCCCA------
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GTCRGCCCSGAKCGGS
-------CGGAGC---
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GTCRGCCCSGAKCGGS-
NTCNTCCCCTATNNGNN
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GTCRGCCCSGAKCGGS
TGAGTCAGCA---------
 A C G T A C G T A C G T A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GTCRGCCCSGAKCGGS
--NNGCNCTGCGCGGC
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GTCRGCCCSGAKCGGS
--CACCCCCGGGGGGG
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:GTCRGCCCSGAKCGGS
---TACCCGCATN---
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GTCRGCCCSGAKCGGS
--AGGCCTAG------
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:forward strand
Alignment:GTCRGCCCSGAKCGGS
---TGCCCTGAGGGCA
 A T C G A G C T A G T C C T A G A C T G A G T C A G T C A G T C A T C G A C T G C G T A A C G T A G T C A T C G T A C G A T C G
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A