Information for 7-AACCAATCAG (Motif 4)

G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
Reverse Opposite:
T A G C G A C T A T C G G C T A A C G T A C G T A T C G A T C G G A C T C A G T
p-value:1e-16
log p-value:-3.828e+01
Information Content per bp:1.686
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.88%
Number of Background Sequences with motif882.1
Percentage of Background Sequences with motif1.84%
Average Position of motif in Targets51.7 +/- 25.9bp
Average Position of motif in Background50.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.94
Offset:-5
Orientation:forward strand
Alignment:-----AACCAATCAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--AACCAATCAG------
TGGACCAATCAGCACTCT
 A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AACCAATCAG
AGCCAATCGG
 G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---AACCAATCAG
ACTAGCCAATCA-
 A C G T A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AACCAATCAG
--CCAATCAA
 G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AACCAATCAG---
AACAACCAATTAATTC
 A C G T A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AACCAATCAG-
-CCCAATTAGC
 G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G A C G T
A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AACCAATCAG----
GAAGACCAATTAGCGCT
 A C G T A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AACCAATCAG-----
CGACCCAATCAACGGTG
 A C G T A C G T G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AACCAATCAG
--CCAATTAA
 G T C A C T G A T A G C A T G C G T C A T G C A C G A T T A G C C T G A A T C G
A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A