Information for 13-GCCCGCTATT (Motif 18)

A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A C T G A G T C A C T G A T C G C T A G A G T C
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.936
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.1 +/- 19.8bp
Average Position of motif in Background43.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCCGCTATT-
GTCCGCCATTA
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCTATT----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCTATT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCTATT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCCCGCTATT-----
-----CTATTTTTGG
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCCGCTATT------
----KCTATTTTTRGH
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCCGCTATT-
-CCAGCTGTTN
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCCCGCTATT------
----GCTATTTTTGGM
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCCCGCTATT------
----GCTATTTTTAGC
 A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCTATT---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C A G T C A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G