Information for 11-AAGGACACCC (Motif 15)

G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C
Reverse Opposite:
A C T G C A T G C A T G C G A T A C T G A G C T G A T C G T A C G A C T C A G T
p-value:1e-10
log p-value:-2.373e+01
Information Content per bp:1.550
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif183.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets53.6 +/- 26.1bp
Average Position of motif in Background51.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGGACACCC----
ATAAATGACACCTATCA
 A C G T A C G T A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGACACCC
CAAGGHCANV-
 A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGGACACCC--
--GGAAANCCCC
 G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGACACCC
AAGGTCAC--
 G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGGACACCC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGGACACCC--
--GGAAATCCCC
 G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAGGACACCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGGACACCC--
--GGAAATTCCC
 G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGACACCC
CCAGGAACAG--
 A C G T A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGGACACCC----
AATNTTGATACCCTATN
 A C G T A C G T A C G T G T C A C T G A C A T G C T A G T C G A T G A C G C T A G T A C G T A C T G A C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T