Information for 4-AGGGGGCGCTGTC (Motif 2)

C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
Reverse Opposite:
A T C G G T C A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G T C A G T C G C A T
p-value:1e-45
log p-value:-1.049e+02
Information Content per bp:1.717
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.33%
Number of Background Sequences with motif157.7
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets58.1 +/- 21.6bp
Average Position of motif in Background45.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGGGGGCGCTGTC-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTC
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------AGGGGGCGCTGTC
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------AGGGGGCGCTGTC
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGGGGGCGCTGTC
----GGCGCGCT-
 C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGGGGCGCTGTC--
TTGGGGGCGCCCCTAG
 A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTC
ANTGCGGGGGCGGN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AGGGGGCGCTGTC
------NGCTN--
 C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGGGGCGCTGTC-
AAGGKGRCGCAGGCA
 A C G T C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGGGGGCGCTGTC
---CGGAGC----
 C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C A C G T A T C G C A G T T A G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T