Information for 23-CAGAGGGCCAATA (Motif 39)

A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 24.3bp
Average Position of motif in Background45.0 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGAGGGCCAATA--
-----AGCCAATCGG
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGCCAATA
AACAGATGGC-----
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAGGGCCAATA
TGGCACCATGCCAA--
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGAGGGCCAATA
-----TGCCAA--
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGAGGGCCAATA
---CGTGCCAAG-
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGAGGGCCAATA--
AAATGGACCAATCAG
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGAGGGCCAATA
---GGTGCCAAGT
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGCCAATA
AACAGATGGT-----
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAGGGCCAATA
---WAAGTAAAYA
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGAGGGCCAATA-
--ACTAGCCAATCA
 A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T C G T A A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A