Information for 17-CCGAGGAAAG (Motif 38)

A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T A T G C A G T C A G C T A G T C A C T G A C T G
p-value:1e-5
log p-value:-1.362e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif48.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets67.6 +/- 27.1bp
Average Position of motif in Background55.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGAGGAAAG
CCAGGAACAG
 A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGAGGAAAG---
GCCGCGCAGTGCGT
 A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGGAAAG-
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCGAGGAAAG
CAAAGGTCAG
 A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CCGAGGAAAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGAGGAAAG
GAGSCCGAGC----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CCGAGGAAAG----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGGAAAG----
TCCCAGMCRAGCCCC
 A C G T A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCGAGGAAAG
-TRAGGTCA-
 A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCGAGGAAAG
-TGGGGA---
 A G T C A G T C A C T G C T G A A C T G A T C G C G T A T C G A C G T A A C T G
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T