Information for 18-KCMCGTGAGGCCG (Motif 32)

C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
Reverse Opposite:
G T A C A C T G A T C G A G T C A G T C C G A T A G T C G T C A A G T C A T C G A C G T A C T G G T A C
p-value:1e-7
log p-value:-1.765e+01
Information Content per bp:1.732
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.4 +/- 28.0bp
Average Position of motif in Background51.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:KCMCGTGAGGCCG-------
------CAGGCCNNGGCCNN
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:KCMCGTGAGGCCG---
------GAGSCCGAGC
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:KCMCGTGAGGCCG
-----CTAGGCCT
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-KCMCGTGAGGCCG
ATGCCCTGAGGC--
 A C G T C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:KCMCGTGAGGCCG--
-------AGGCCTNG
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:KCMCGTGAGGCCG-
--SCCTSAGGSCAW
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

BHLHE40/MA0464.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KCMCGTGAGGCCG
GTCACGTGAN----
 A C G T C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KCMCGTGAGGCCG
-NGCCTGAGGCN-
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:KCMCGTGAGGCCG
GCACGTGA-----
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KCMCGTGAGGCCG
NCACGTGACN---
 C A T G A G T C T G C A T A G C C T A G A C G T A C T G C G T A A C T G A C T G A T G C G T A C A C T G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T