Information for 7-WTATGCGCAT (Motif 3)

G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A G T C A C T G A G T C C G T A A G C T C G T A C G A T
p-value:1e-17
log p-value:-4.059e+01
Information Content per bp:1.861
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.5 +/- 13.9bp
Average Position of motif in Background47.6 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WTATGCGCAT
-TATGCAAAT
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:WTATGCGCAT
TTATGCAAAT
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:WTATGCGCAT----
--GTGCGCATGCGC
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---WTATGCGCAT----
CAGATGTGCACATACGT
 A C G T A C G T A C G T G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:WTATGCGCAT--
TTATGCAAATTA
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:WTATGCGCAT----
---TGCGCAGGCGC
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WTATGCGCAT-
AATATGCAAATT
 A C G T G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WTATGCGCAT--
TTATGCAAATTA
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---WTATGCGCAT----
TACATGTGCACATAAAA
 A C G T A C G T A C G T G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WTATGCGCAT
ATATGCAAAT
 G C T A G C A T C T G A A C G T A C T G A G T C A C T G A G T C C G T A C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T