Information for 20-GCGGATTAGGGAAGGM (Motif 27)

C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G A T C G A T A G T C A G T C A G T C A G C T C G T A G T C A A G C T A G T C G T A C A T C G A G T C
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.760
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 27.8bp
Average Position of motif in Background58.7 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCGGATTAGGGAAGGM--
------TGGGGAAGGGCM
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGATTAGGGAAGGM
GNGGATTAGN------
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGGATTAGGGAAGGM
NNGGATTAGN------
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGATTAGGGAAGGM
AAGAGGATTAG-------
 A C G T A C G T C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCGGATTAGGGAAGGM
TGAACCGGATTAATGAA---
 A C G T A C G T A C G T A C G T C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCGGATTAGGGAAGGM
TGAACCGGATTAATGAA---
 A C G T A C G T A C G T A C G T C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGGATTAGGGAAGGM
--GGATTAGC------
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCGGATTAGGGAAGGM
-----TNNGGGCAG--
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCGGATTAGGGAAGGM
NNAAGGGATTAACGANT--
 A C G T A C G T A C G T C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGGATTAGGGAAGGM
-GGGATTANN------
 C T A G T A G C A C T G T A C G C T G A A C G T G A C T C T G A A C T G A C T G C T A G C G T A C G T A A C T G C T A G G T A C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T