Information for 18-ATATGTWTWTCTGATT (Motif 24)

C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A G T C C G T A A C T G G T C A C G A T G T C A C G A T T C G A G A T C T C G A C A G T T G C A C G A T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.686
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 28.7bp
Average Position of motif in Background24.5 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EN1/MA0027.2/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAG
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:forward strand
Alignment:ATATGTWTWTCTGATT--
--------AGCTCATTAT
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

VSX2/MA0726.1/Jaspar

Match Rank:3
Score:0.57
Offset:10
Orientation:forward strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAG
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAA
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

PAX4/MA0068.2/Jaspar

Match Rank:5
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAG
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:6
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT-
---------NCTAATTA
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

MIXL1/MA0662.1/Jaspar

Match Rank:7
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT---
---------NNTAATTANN
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

VSX1/MA0725.1/Jaspar

Match Rank:8
Score:0.57
Offset:10
Orientation:forward strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAT
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATATGTWTWTCTGATT-
---NNTTTTTCTTATNT
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

Lhx8/MA0705.1/Jaspar

Match Rank:10
Score:0.56
Offset:10
Orientation:forward strand
Alignment:ATATGTWTWTCTGATT--
----------CTAATTAG
 C G T A A C G T G T C A A G C T C T A G A G C T C G T A A C G T C G T A A C G T A G T C C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G