Information for 5-TAAAAGGCAVATK (Motif 7)

C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
Reverse Opposite:
G T C A C G T A A G C T A G T C G C A T A C T G A G T C A G T C C G A T A C G T A G C T C G A T G C T A
p-value:1e-14
log p-value:-3.414e+01
Information Content per bp:1.680
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif48.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.5 +/- 14.9bp
Average Position of motif in Background39.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGGCAVATK
GNCTATAAAAGG------
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAAAAGGCAVATK
-AAAAGTCAA---
 C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAAAAGGCAVATK
AAAGATCAAAGGAA----
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGGCAVATK
ACATCAAAGGNA----
 A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAAAAGGCAVATK
NNATAAGGNN----
 A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TAAAAGGCAVATK
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGGCAVATK
GCTAAACGGT-----
 A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGGCAVATK
ACATCAAAGG------
 A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TAAAAGGCAVATK
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAAAAGGCAVATK-
---AAGGCAAGTGT
 C G A T G C T A C T G A C G T A C G T A A C T G T A C G T G A C C G T A T C A G T C G A C G A T C A G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T