Information for 15-GGCAGTCAAC (Motif 43)

A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.2 +/- 17.4bp
Average Position of motif in Background62.1 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCAGTCAAC
-GCTGTCAA-
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTCAAC
SCTGTCAVTCAV-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTCAAC
AGCCACTCAAG
 A C G T A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCAGTCAAC---
-SCTGTCARCACC
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCAGTCAAC
-CCAATCAA-
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTCAAC
NCTGTCAATCAN-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCAGTCAAC
-CCTGTCAA-
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGCAGTCAAC--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAGTCAAC
AAAAGTCAA-
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAGTCAAC
GGCVGTTR--
 A C T G A C T G A G T C C G T A A C T G A C G T A G T C C G T A C G T A A G T C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T