Information for 9-GTGTGAAAAS (Motif 29)

T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
Reverse Opposite:
A T G C A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T G C
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.779
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif192.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets52.4 +/- 22.7bp
Average Position of motif in Background49.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------GTGTGAAAAS-
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAAAAS
AAGGTGTGAAAAT
 A C G T A C G T A C G T T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGTGAAAAS
-RHTGWCAR-
 T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTGTGAAAAS
--TTGACAG-
 T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAAAAS
AGGTGTGAAA--
 A C G T A C G T T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGTGAAAAS
--TTGACAGG
 T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAAAAS-----
TAAACTGATAAGAAGAT
 A C G T A C G T T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAAAAS
AAGGTGTGAAA--
 A C G T A C G T A C G T T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGTGAAAAS-
-NBWGATAAGR
 T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G A C G T
A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGTGAAAAS
ARNTGACA--
 T A C G C G A T T C A G A C G T A C T G C G T A G T C A C G T A C G T A T A C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T