Information for 19-ATTTACTTAAATATTC (Motif 23)

C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
Reverse Opposite:
C T A G G T C A C G T A A C G T G T C A C G A T C G A T C A G T C G T A C T G A T C A G A C G T T G C A C G T A C G T A C G A T
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.708
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.1 +/- 24.6bp
Average Position of motif in Background56.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0095.1_Lhx5/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTACTTAAATATTC
CGAATTAATTAAATACT-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTACTTAAATATTC
GAAATTAATTAAATAAT-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTACTTAAATATTC
NNAATTAATTAAAAANN-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTTACTTAAATATTC
-TTGACTTTT------
 C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTTACTTAAATATTC
CGAATTAATTAATAATG-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTTACTTAAATATTC
CGAATTAATTAAAAACC-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTTACTTAAATATTC
NANTTAATTAATTANNN
 A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0142.1_Pou1f1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTTACTTAAATATTC
GANTTAATTAATTANNN
 A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTTACTTAAATATTC
CGAGTTAATTAATAATT-
 A C G T A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
G T A C T A C G G T C A C T A G G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A C T C T G A T G C A G C A T A G C T A C G T

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTTACTTAAATATTC
GANTTAATTAATTAANN
 A C G T C G T A C G A T C G A T A C G T C G T A A G T C A G C T A C G T G T C A C G T A G C T A C A G T G T C A G A C T C A G T A G T C
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T