Information for 16-CWCTAAGTGRTTTTRA (Motif 18)

A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
Reverse Opposite:
C G A T G A T C G C T A G C T A C G T A C G T A A G C T A G T C C G T A G T A C G C A T A G C T C G T A C T A G C G T A A C T G
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.4 +/- 18.4bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CWCTAAGTGRTTTTRA
---TAATTGATTA---
 A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAAGTGRTTTTRA
GNNTTAATTGGTTGTT-
 A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CWCTAAGTGRTTTTRA
NNNNNCTAATTAGTTTA--
 A C G T A C G T A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CWCTAAGTGRTTTTRA
NTNNTTAAGTGGTTANN-
 A C G T A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CWCTAAGTGRTTTTRA
--TTAAGTGCTT----
 A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

PH0088.1_Isl2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAAGTGRTTTTRA
AAATTAATTGATTTNG-
 A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CWCTAAGTGRTTTTRA
--TTAAGTGGT-----
 A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CWCTAAGTGRTTTTRA
--TTAAGTGGN-----
 A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAAGTGRTTTTRA
NNNTTAATTGGTTTTN-
 A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CWCTAAGTGRTTTTRA
NNNTTAATTGGTTTTT-
 A C G T A G T C C G A T A G T C C G A T C T G A C G T A A C T G A C G T C T A G T C G A A C G T A C G T C A G T C G A T C T A G G C T A
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T