Information for 7-TTCMCTTAATCTC (Motif 15)

A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G G C T A A C G T A C G T C G T A C T G A A C T G A C T G T C A G C G T A C G T A
p-value:1e-11
log p-value:-2.623e+01
Information Content per bp:1.834
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.2 +/- 24.9bp
Average Position of motif in Background53.8 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TTCMCTTAATCTC
-----YTAATCCY
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCMCTTAATCTC-
----NYTAATCCYB
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTCMCTTAATCTC
----CTTAATCCC
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTCMCTTAATCTC----
GATAATTAATCCCTCTT
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TTCMCTTAATCTC
-----TTAATCCC
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCMCTTAATCTC----
NANANTTAATCCCNNNN
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTCMCTTAATCTC
-----TTAATCCT
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCMCTTAATCTC-
----GCTAATCCCC
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCMCTTAATCTC----
GANNATTAATCCCTNNN
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTCMCTTAATCTC-
----CCTAATCCGC
 A C G T C G A T A G T C G T A C T A G C A G C T A C G T C G T A C G T A C G A T A G T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C