Information for 20-GGCCTCCAGGAAA (Motif 21)

A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A T G C A G T C A C G T A C T G C T A G C G T A A C T G T A C G A G T C A G T C
p-value:1e-6
log p-value:-1.532e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.7 +/- 29.4bp
Average Position of motif in Background49.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCCTCCAGGAAA
NNNCTTTCCAGGAAA
 A C G T A C G T A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTCCAGGAAA
NGCTTTCTAGGAAN
 A C G T A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGCCTCCAGGAAA-
----NACAGGAAAT
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCCTCCAGGAAA
-NTTTCCNGGAAA
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGCCTCCAGGAAA-
----NACAGGAAAT
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCTCCAGGAAA
--TTTCCAGGAAA
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCTCCAGGAAA-
NNCTTCCNGGAAGN
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A A C G T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCCTCCAGGAAA
-GGCTCYAKCAYC
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCTCCAGGAAA-
NATTTCCNGGAAAT
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCCTCCAGGAAA---
--TTTCCAGGAAATGG
 A C T G C T A G A T G C G T A C A C G T A G T C A G T C G T C A A C T G A T C G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G