Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-51 | -1.191e+02 | 0.0000 | 68.0 | 8.14% | 292.9 | 0.61% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-39 | -9.079e+01 | 0.0000 | 73.0 | 8.74% | 548.3 | 1.14% | motif file (matrix) |
svg |
3 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-8 | -2.051e+01 | 0.0000 | 69.0 | 8.26% | 1792.5 | 3.72% | motif file (matrix) |
svg |
4 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-8 | -1.890e+01 | 0.0000 | 77.0 | 9.22% | 2187.9 | 4.54% | motif file (matrix) |
svg |
5 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-7 | -1.719e+01 | 0.0000 | 13.0 | 1.56% | 99.0 | 0.21% | motif file (matrix) |
svg |
6 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | -1.692e+01 | 0.0000 | 96.0 | 11.50% | 3108.8 | 6.45% | motif file (matrix) |
svg |
7 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-6 | -1.605e+01 | 0.0000 | 64.0 | 7.66% | 1809.3 | 3.75% | motif file (matrix) |
svg |
8 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.370e+01 | 0.0001 | 14.0 | 1.68% | 158.7 | 0.33% | motif file (matrix) |
svg |
9 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-5 | -1.338e+01 | 0.0001 | 55.0 | 6.59% | 1586.6 | 3.29% | motif file (matrix) |
svg |
10 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.332e+01 | 0.0001 | 227.0 | 27.19% | 9836.6 | 20.41% | motif file (matrix) |
svg |
11 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.321e+01 | 0.0001 | 51.0 | 6.11% | 1433.7 | 2.98% | motif file (matrix) |
svg |
12 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-5 | -1.289e+01 | 0.0001 | 26.0 | 3.11% | 520.9 | 1.08% | motif file (matrix) |
svg |
13 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-5 | -1.246e+01 | 0.0001 | 6.0 | 0.72% | 23.1 | 0.05% | motif file (matrix) |
svg |
14 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-4 | -1.146e+01 | 0.0003 | 74.0 | 8.86% | 2524.8 | 5.24% | motif file (matrix) |
svg |
15 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.067e+01 | 0.0006 | 178.0 | 21.32% | 7664.7 | 15.90% | motif file (matrix) |
svg |
16 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.036e+01 | 0.0007 | 110.0 | 13.17% | 4305.2 | 8.93% | motif file (matrix) |
svg |
17 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-4 | -1.000e+01 | 0.0010 | 75.0 | 8.98% | 2687.9 | 5.58% | motif file (matrix) |
svg |
18 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -9.883e+00 | 0.0010 | 83.0 | 9.94% | 3069.0 | 6.37% | motif file (matrix) |
svg |
19 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.764e+00 | 0.0011 | 41.0 | 4.91% | 1213.1 | 2.52% | motif file (matrix) |
svg |
20 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-4 | -9.512e+00 | 0.0013 | 24.0 | 2.87% | 563.6 | 1.17% | motif file (matrix) |
svg |
21 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -9.106e+00 | 0.0019 | 18.0 | 2.16% | 368.7 | 0.76% | motif file (matrix) |
svg |
22 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -8.887e+00 | 0.0023 | 36.0 | 4.31% | 1057.1 | 2.19% | motif file (matrix) |
svg |
23 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.819e+00 | 0.0023 | 39.0 | 4.67% | 1185.7 | 2.46% | motif file (matrix) |
svg |
24 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.277e+00 | 0.0039 | 17.0 | 2.04% | 360.7 | 0.75% | motif file (matrix) |
svg |
25 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -7.876e+00 | 0.0055 | 25.0 | 2.99% | 669.9 | 1.39% | motif file (matrix) |
svg |
26 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -7.835e+00 | 0.0055 | 30.0 | 3.59% | 870.0 | 1.81% | motif file (matrix) |
svg |
27 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -7.583e+00 | 0.0069 | 21.0 | 2.51% | 529.6 | 1.10% | motif file (matrix) |
svg |
28 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.492e+00 | 0.0072 | 29.0 | 3.47% | 848.8 | 1.76% | motif file (matrix) |
svg |
29 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.169e+00 | 0.0097 | 90.0 | 10.78% | 3691.0 | 7.66% | motif file (matrix) |
svg |
30 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-3 | -7.147e+00 | 0.0097 | 98.0 | 11.74% | 4090.1 | 8.49% | motif file (matrix) |
svg |
31 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.788e+00 | 0.0132 | 16.0 | 1.92% | 376.8 | 0.78% | motif file (matrix) |
svg |
32 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.663e+00 | 0.0145 | 36.0 | 4.31% | 1197.9 | 2.49% | motif file (matrix) |
svg |
33 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.630e+00 | 0.0146 | 42.0 | 5.03% | 1466.0 | 3.04% | motif file (matrix) |
svg |
34 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.619e+00 | 0.0146 | 30.0 | 3.59% | 941.1 | 1.95% | motif file (matrix) |
svg |
35 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.603e+00 | 0.0146 | 148.0 | 17.72% | 6727.4 | 13.96% | motif file (matrix) |
svg |
36 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.446e+00 | 0.0161 | 32.0 | 3.83% | 1039.0 | 2.16% | motif file (matrix) |
svg |
37 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.377e+00 | 0.0167 | 21.0 | 2.51% | 584.0 | 1.21% | motif file (matrix) |
svg |
38 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -6.339e+00 | 0.0169 | 31.0 | 3.71% | 1002.2 | 2.08% | motif file (matrix) |
svg |
39 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.295e+00 | 0.0172 | 93.0 | 11.14% | 3953.1 | 8.20% | motif file (matrix) |
svg |
40 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.936e+00 | 0.0240 | 83.0 | 9.94% | 3501.1 | 7.26% | motif file (matrix) |
svg |
41 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.675e+00 | 0.0305 | 44.0 | 5.27% | 1640.2 | 3.40% | motif file (matrix) |
svg |
42 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.632e+00 | 0.0310 | 44.0 | 5.27% | 1644.2 | 3.41% | motif file (matrix) |
svg |
43 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.536e+00 | 0.0334 | 181.0 | 21.68% | 8679.3 | 18.01% | motif file (matrix) |
svg |
44 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.413e+00 | 0.0369 | 33.0 | 3.95% | 1158.6 | 2.40% | motif file (matrix) |
svg |
45 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -5.393e+00 | 0.0369 | 107.0 | 12.81% | 4801.6 | 9.96% | motif file (matrix) |
svg |
46 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.380e+00 | 0.0369 | 306.0 | 36.65% | 15582.4 | 32.33% | motif file (matrix) |
svg |
47 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.348e+00 | 0.0369 | 63.0 | 7.54% | 2586.3 | 5.37% | motif file (matrix) |
svg |
48 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.340e+00 | 0.0369 | 43.0 | 5.15% | 1625.4 | 3.37% | motif file (matrix) |
svg |
49 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.337e+00 | 0.0369 | 24.0 | 2.87% | 767.1 | 1.59% | motif file (matrix) |
svg |
50 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.041e+00 | 0.0471 | 41.0 | 4.91% | 1560.7 | 3.24% | motif file (matrix) |
svg |
51 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.987e+00 | 0.0487 | 134.0 | 16.05% | 6285.8 | 13.04% | motif file (matrix) |
svg |
52 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.906e+00 | 0.0518 | 71.0 | 8.50% | 3041.4 | 6.31% | motif file (matrix) |
svg |
53 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -4.875e+00 | 0.0524 | 80.0 | 9.58% | 3500.6 | 7.26% | motif file (matrix) |
svg |
54 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.838e+00 | 0.0534 | 47.0 | 5.63% | 1867.1 | 3.87% | motif file (matrix) |
svg |
55 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.767e+00 | 0.0563 | 42.0 | 5.03% | 1635.3 | 3.39% | motif file (matrix) |
svg |
56 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.729e+00 | 0.0574 | 12.0 | 1.44% | 309.6 | 0.64% | motif file (matrix) |
svg |
57 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -4.723e+00 | 0.0574 | 113.0 | 13.53% | 5231.0 | 10.85% | motif file (matrix) |
svg |
58 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.705e+00 | 0.0574 | 112.0 | 13.41% | 5181.2 | 10.75% | motif file (matrix) |
svg |