Information for 1-GATGAGACAA (Motif 2)

C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A
Reverse Opposite:
C G A T A C G T A T C G A C G T A T G C G C A T A G T C C G T A A C G T A G T C
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.843
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif73.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets51.3 +/- 27.1bp
Average Position of motif in Background47.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATGAGACAA--
AAGATAAGATAACA
 A C G T A C G T C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATGAGACAA-
GATGAGTCATN
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

JUND/MA0491.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATGAGACAA-
NATGAGTCACN
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATGAGACAA------
-CTCACACAATGGCGC
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

ATF4/MA0833.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATGAGACAA--
GGATGATGCAATA
 A C G T C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATGAGACAA--
GATGAGTCATCC
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

BATF::JUN/MA0462.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GATGAGACAA
GAAATGACTCA-
 A C G T A C G T C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATGAGACAA
GATGAGTCAT
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATGAGACAA
TGCTGAGTCA-
 A C G T C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATGAGACAA
-ATGAGTCAT
 C T A G G T C A A C G T T A C G C G T A A T C G C G T A A T G C G T C A C G T A
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T