Information for 8-TGGGCAAGTG (Motif 18)

A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G
Reverse Opposite:
A T G C G C T A G A T C C A G T A C G T A T C G A G T C G A T C A T G C T C G A
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.685
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif1820.2
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets53.6 +/- 26.6bp
Average Position of motif in Background47.8 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGGGCAAGTG-
TAACGACACGTGC
 A C G T A C G T A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGGGCAAGTG--
--GGCACGTGTC
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T A C G T
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGGCAAGTG---
-SDGCAGGTGCNS
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGGCAAGTG-
-NNCCACGTGG
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGGGCAAGTG--
--GACACGTGCC
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T A C G T
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGGCAAGTG-
-GGTCACGTGA
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGGGCAAGTG--
--GGCACGTGTC
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGGGCAAGTG-
-NGKCACGTGM
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T
A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGGGCAAGTG
--GNCACGTG
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGGCAAGTG--
NNACCACGTGGT
 A G C T T A C G C T A G T C A G T A G C T G C A G T C A C T A G C G A T A T C G A C G T A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T