Information for 7-AATGGMAACA (Motif 17)

T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
Reverse Opposite:
C G A T A T C G A C G T C A G T A C T G T A G C G T A C G C T A A C G T A C G T
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.594
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif16.52%
Number of Background Sequences with motif4771.6
Percentage of Background Sequences with motif10.18%
Average Position of motif in Targets52.3 +/- 28.0bp
Average Position of motif in Background49.4 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AATGGMAACA
AATGGAAAAT
 T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATGGMAACA
AATGGAAAAT
 T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AATGGMAACA
NNTGGAAANN
 T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AATGGMAACA
TTGCCATGGCAACN
 A C G T A C G T A C G T A C G T T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AATGGMAACA
TTGCCATGGCAACC
 A C G T A C G T A C G T A C G T T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATGGMAACA-
SCCTAGCAACAG
 A C G T T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AATGGMAACA
GTTGCCATGGCAAC-
 A C G T A C G T A C G T A C G T A C G T T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AATGGMAACA
NATGGAAAAN
 T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATGGMAACA-
GAGAACCGAAACTG
 A C G T A C G T A C G T T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AATGGMAACA-
---GTAAACAG
 T G C A T G C A C G A T C A T G A T C G T G A C G T C A T G C A T A G C G C T A A C G T
A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G