Information for 6-GCTTGTGCTGGTG (Motif 13)

A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
Reverse Opposite:
A T G C C G T A A T G C A G T C C G T A A C T G A G T C C G T A A G T C C G T A C G T A T A C G A G T C
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 15.9bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGTGCTGGTG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTGTGCTGGTG-------
GNCTGTASTRNTGBCTCHTT
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCTTGTGCTGGTG---
----SDGCAGGTGCNS
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTTGTGCTGGTG
NNHTGTGGTTWN-
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCTTGTGCTGGTG-
---CATGCGGGTAC
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G A C G T
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTTGTGCTGGTG
---TATGCGGGTA
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGTGCTGGTG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCTTGTGCTGGTG
-----NGCTN---
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTTGTGCTGGTG
-AATTTGCTGAC-
 A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGTGCTGGTG--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C T G A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A T C G A C G T A T C G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T