Information for 5-AGTTCTGTGC (Motif 11)

C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A A G T C T C G A C A T G G T C A G T C A G T A C C G A T
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.828
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif188.5
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets53.4 +/- 30.5bp
Average Position of motif in Background49.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCTGTGC----
NNNNTTGTGTGCTTNN
 A C G T A C G T C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGTTCTGTGC----
----CTGTTCCTGG
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTTCTGTGC
---GCTGTG-
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTTCTGTGC-------
NTNTATGTGCACATNNN
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCTGTGC----
NNGCGTGTGTGCNGCN
 A C G T A C G T C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTTCTGTGC-------
NNGTATGTGCACATNNN
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTTCTGTGC----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTTCTGTGC--
--TTGCGTGCVA
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTTCTGTGC---
--GTCTGTGGTTT
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGTTCTGTGC--
--TKCTGTTCCA
 C G T A A C T G C A G T A C G T G T A C A G C T A C T G C G A T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A