Information for 4-GTGCRGSYKGAGT (Motif 6)

A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A G T C G T A C C T A G A T C G A G T C A G T C A C T G A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.875
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 20.1bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGCRGSYKGAGT
-RGKGGGCGGAGC
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTGCRGSYKGAGT----
------CTTGAGTGGCT
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGCRGSYKGAGT
GTGGGGGAGGGG-
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGCRGSYKGAGT
TATGCGGGTA----
 A C G T A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTGCRGSYKGAGT
GGCGGGGGCGGGGG
 A C G T A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GTGCRGSYKGAGT----
-------TTRAGTGSYK
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GTGCRGSYKGAGT---
------CTYRAGTGSY
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GTGCRGSYKGAGT
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTGCRGSYKGAGT
CATGCGGGTAC---
 A C G T A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GTGCRGSYKGAGT----
-------TTGAGTGSTT
 A C T G A C G T A C T G A G T C C T A G A C T G A T G C A G T C C A T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T