Information for 2-CGGGCACGTGCSC (Motif 2)

A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
Reverse Opposite:
C T A G A T G C A T C G A G T C C G T A G A T C A C T G A G C T A C T G G T A C T G A C A G T C A C T G
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.798
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.63%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets67.4 +/- 15.9bp
Average Position of motif in Background51.6 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEY1/MA0823.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
--GGCACGTGTC-
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
-NGKCACGTGM--
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CGGGCACGTGCSC
--GACACGTGCC-
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
--GTCACGTGAN-
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGGGCACGTGCSC
-NNCCACGTGG--
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
-TGGCACGTGCCA
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
--NGCACGTGNT-
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
-TGGCACGTGCCG
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGGGCACGTGCSC
--NNCGCGTGNN-
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CGGGCACGTGCSC
--GNCACGTG---
 A G T C C T A G A C T G A C T G A G T C T C G A G T A C C T A G A C G T A C T G A T G C A T C G A G T C
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T