Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-168 | -3.884e+02 | 0.0000 | 154.0 | 17.44% | 281.1 | 0.59% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-124 | -2.862e+02 | 0.0000 | 159.0 | 18.01% | 618.3 | 1.31% | motif file (matrix) |
svg |
3 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-43 | -9.960e+01 | 0.0000 | 27.0 | 3.06% | 15.6 | 0.03% | motif file (matrix) |
svg |
4 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-25 | -5.893e+01 | 0.0000 | 41.0 | 4.64% | 232.2 | 0.49% | motif file (matrix) |
svg |
5 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-24 | -5.631e+01 | 0.0000 | 119.0 | 13.48% | 2173.7 | 4.59% | motif file (matrix) |
svg |
6 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-23 | -5.334e+01 | 0.0000 | 103.0 | 11.66% | 1761.8 | 3.72% | motif file (matrix) |
svg |
7 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-22 | -5.205e+01 | 0.0000 | 39.0 | 4.42% | 248.1 | 0.52% | motif file (matrix) |
svg |
8 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-18 | -4.329e+01 | 0.0000 | 33.0 | 3.74% | 217.0 | 0.46% | motif file (matrix) |
svg |
9 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.260e+01 | 0.0000 | 85.0 | 9.63% | 1487.8 | 3.14% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-18 | -4.205e+01 | 0.0000 | 96.0 | 10.87% | 1841.3 | 3.89% | motif file (matrix) |
svg |
11 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-17 | -4.073e+01 | 0.0000 | 78.0 | 8.83% | 1325.3 | 2.80% | motif file (matrix) |
svg |
12 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-17 | -4.052e+01 | 0.0000 | 44.0 | 4.98% | 451.9 | 0.96% | motif file (matrix) |
svg |
13 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-17 | -4.047e+01 | 0.0000 | 158.0 | 17.89% | 4085.5 | 8.63% | motif file (matrix) |
svg |
14 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-17 | -3.941e+01 | 0.0000 | 169.0 | 19.14% | 4560.7 | 9.64% | motif file (matrix) |
svg |
15 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-17 | -3.922e+01 | 0.0000 | 86.0 | 9.74% | 1606.4 | 3.39% | motif file (matrix) |
svg |
16 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.735e+01 | 0.0000 | 110.0 | 12.46% | 2868.6 | 6.06% | motif file (matrix) |
svg |
17 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-10 | -2.476e+01 | 0.0000 | 208.0 | 23.56% | 7107.8 | 15.02% | motif file (matrix) |
svg |
18 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-10 | -2.409e+01 | 0.0000 | 128.0 | 14.50% | 3743.5 | 7.91% | motif file (matrix) |
svg |
19 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.332e+01 | 0.0000 | 42.0 | 4.76% | 693.0 | 1.46% | motif file (matrix) |
svg |
20 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-8 | -1.901e+01 | 0.0000 | 175.0 | 19.82% | 6107.6 | 12.91% | motif file (matrix) |
svg |
21 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-8 | -1.897e+01 | 0.0000 | 39.0 | 4.42% | 713.0 | 1.51% | motif file (matrix) |
svg |
22 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.830e+01 | 0.0000 | 236.0 | 26.73% | 8975.4 | 18.97% | motif file (matrix) |
svg |
23 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-7 | -1.780e+01 | 0.0000 | 72.0 | 8.15% | 1893.2 | 4.00% | motif file (matrix) |
svg |
24 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-7 | -1.738e+01 | 0.0000 | 80.0 | 9.06% | 2220.7 | 4.69% | motif file (matrix) |
svg |
25 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.610e+01 | 0.0000 | 47.0 | 5.32% | 1064.3 | 2.25% | motif file (matrix) |
svg |
26 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-6 | -1.562e+01 | 0.0000 | 187.0 | 21.18% | 6967.0 | 14.72% | motif file (matrix) |
svg |
27 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.041e+01 | 0.0004 | 57.0 | 6.46% | 1717.7 | 3.63% | motif file (matrix) |
svg |
28 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.032e+01 | 0.0004 | 65.0 | 7.36% | 2049.1 | 4.33% | motif file (matrix) |
svg |
29 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.314e+00 | 0.0031 | 5.0 | 0.57% | 29.2 | 0.06% | motif file (matrix) |
svg |
30 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.989e+00 | 0.0041 | 10.0 | 1.13% | 138.3 | 0.29% | motif file (matrix) |
svg |
31 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-3 | -7.950e+00 | 0.0041 | 20.0 | 2.27% | 443.9 | 0.94% | motif file (matrix) |
svg |
32 |
| E-box(bHLH)/Promoter/Homer | 1e-3 | -7.786e+00 | 0.0047 | 14.0 | 1.59% | 255.2 | 0.54% | motif file (matrix) |
svg |
33 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-3 | -7.253e+00 | 0.0078 | 20.0 | 2.27% | 469.1 | 0.99% | motif file (matrix) |
svg |
34 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.764e+00 | 0.0124 | 132.0 | 14.95% | 5444.7 | 11.51% | motif file (matrix) |
svg |
35 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -6.624e+00 | 0.0138 | 69.0 | 7.81% | 2533.1 | 5.35% | motif file (matrix) |
svg |
36 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -6.548e+00 | 0.0145 | 75.0 | 8.49% | 2811.6 | 5.94% | motif file (matrix) |
svg |
37 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.361e+00 | 0.0170 | 33.0 | 3.74% | 1009.4 | 2.13% | motif file (matrix) |
svg |
38 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.257e+00 | 0.0184 | 17.0 | 1.93% | 403.2 | 0.85% | motif file (matrix) |
svg |
39 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.019e+00 | 0.0227 | 21.0 | 2.38% | 560.0 | 1.18% | motif file (matrix) |
svg |
40 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.682e+00 | 0.0310 | 46.0 | 5.21% | 1608.5 | 3.40% | motif file (matrix) |
svg |
41 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -5.348e+00 | 0.0422 | 9.0 | 1.02% | 167.5 | 0.35% | motif file (matrix) |
svg |
42 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.162e+00 | 0.0496 | 49.0 | 5.55% | 1789.3 | 3.78% | motif file (matrix) |
svg |
43 |
| ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.139e+00 | 0.0497 | 8.0 | 0.91% | 142.5 | 0.30% | motif file (matrix) |
svg |
44 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.118e+00 | 0.0497 | 4.0 | 0.45% | 38.3 | 0.08% | motif file (matrix) |
svg |
45 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -4.786e+00 | 0.0675 | 32.0 | 3.62% | 1081.8 | 2.29% | motif file (matrix) |
svg |
46 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.754e+00 | 0.0682 | 31.0 | 3.51% | 1041.8 | 2.20% | motif file (matrix) |
svg |
47 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -4.748e+00 | 0.0682 | 91.0 | 10.31% | 3788.4 | 8.01% | motif file (matrix) |
svg |
48 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -4.720e+00 | 0.0682 | 69.0 | 7.81% | 2753.7 | 5.82% | motif file (matrix) |
svg |