Information for 4-GTGAAATGTCAGGGAG (Motif 6)

A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
Reverse Opposite:
A T G C G A C T G A T C G T A C A G T C A G C T C A T G G C T A A G T C G T C A G A C T A G C T G A C T A T G C G T C A G T A C
p-value:1e-16
log p-value:-3.724e+01
Information Content per bp:1.680
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif30.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.6 +/- 24.9bp
Average Position of motif in Background48.4 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
GAGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
GAGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
GGGGTCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAATGTCAGGGAG
ANGNAAAGGTCA-----
 A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTGAAATGTCAGGGAG
AGGGGTCAGAGGTCA-----
 A C G T A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGAAATGTCAGGGAG
TGGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTGAAATGTCAGGGAG
GTAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGAAATGTCAGGGAG
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C T G A C G T T A C G C G T A C T G A C T G A C A G T A C T G C A G T G T A C C T G A T A C G A C T G C T A G C G T A A T C G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T